The effect of the dispersal kernel on isolation-by-distance in a continuous population

نویسندگان

  • Tara N. Furstenau
  • Reed A. Cartwright
چکیده

Under models of isolation-by-distance, population structure is determined by the probability of identity-by-descent between pairs of genes according to the geographic distance between them. Well established analytical results indicate that the relationship between geographical and genetic distance depends mostly on the neighborhood size of the population which represents a standardized measure of gene flow. To test this prediction, we model local dispersal of haploid individuals on a two-dimensional landscape using seven dispersal kernels: Rayleigh, exponential, half-normal, triangular, gamma, Lomax and Pareto. When neighborhood size is held constant, the distributions produce similar patterns of isolation-by-distance, confirming predictions. Considering this, we propose that the triangular distribution is the appropriate null distribution for isolation-by-distance studies. Under the triangular distribution, dispersal is uniform over the neighborhood area which suggests that the common description of neighborhood size as a measure of an effective, local panmictic population is valid for popular families of dispersal distributions. We further show how to draw random variables from the triangular distribution efficiently and argue that it should be utilized in other studies in which computational efficiency is important.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

ارزیابی پیوستگی سیمای سرزمین و کریدورهای مهاجرتی آهوی گواتردار در مناطق مرکزی ایران

Long-term survival of Goitered gazelles in central Iran has been threatened because of isolation of existing populations and genetic threats. Effective management of these small and isolated populations needs to evaluate landscape connectivity among core habitat patches. In the present study, resistance surfaces were mapped as a function of twelve uncorrelated variables using species distributi...

متن کامل

Performance of individual vs. group sampling for inferring dispersal under isolation-by-distance.

Models of isolation-by-distance formalize the effects of genetic drift and gene flow in a spatial context where gene dispersal is spatially limited. These models have been used to show that, at an appropriate spatial scale, dispersal parameters can be inferred from the regression of genetic differentiation against geographic distance between sampling locations. This approach is compelling becau...

متن کامل

یادگیری نیمه نظارتی کرنل مرکب با استفاده از تکنیک‌های یادگیری معیار فاصله

Distance metric has a key role in many machine learning and computer vision algorithms so that choosing an appropriate distance metric has a direct effect on the performance of such algorithms. Recently, distance metric learning using labeled data or other available supervisory information has become a very active research area in machine learning applications. Studies in this area have shown t...

متن کامل

Deconstructing isolation-by-distance: The genomic consequences of limited dispersal

Geographically limited dispersal can shape genetic population structure and result in a correlation between genetic and geographic distance, commonly called isolation-by-distance. Despite the prevalence of isolation-by-distance in nature, to date few studies have empirically demonstrated the processes that generate this pattern, largely because few populations have direct measures of individual...

متن کامل

Population genetic structure of the white sardine, Sardinella albella, in the Persian Gulf and Sea of Oman by analysis of mitochondrial control region

Several studies on the white sardine: Sardinella albella, have focused on the identification of stock composition and behavior. In this study population genetic structure and historical demography of S. albella along the cost of the Persian Gulf and Sea of Oman were investigated with a 500-bp segment of mt-DNA control region. In total 40 samples were collected from 3 locations: Jask in Sea of O...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:

دوره 4  شماره 

صفحات  -

تاریخ انتشار 2016